Gene: Solyc12g044900.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g044900.3
- Transcript Identifier Solyc12g044900.3.1
- Gene Type Coding gene
- Location SL4.0ch12 : 59899453-59905967 : positive
Gene Family Information
- ID HOM05D001162
- #Genes/#Species 531/99
- Phylogenetic origin
- ID ORTHO05D001218
- #Genes/#Species 454/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g044900.3.1
- uniprot A0A3Q7J9I3
- gene_id Solyc12g044900
Descriptions
- Description Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** A0A2G2Y8R1_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016320 | IBA | GOA Database | endoplasmic reticulum membrane fusion | |
| GO:0010053 | ISO | PLAZA Integrative Orthology | root epidermal cell differentiation | AT3G13870 |
| GO:0006888 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum to Golgi vesicle-mediated transport | AT3G13870 |
| GO:0030036 | ISO | PLAZA Integrative Orthology | actin cytoskeleton organization | AT3G13870 |
| GO:0009932 | ISO | PLAZA Integrative Orthology | cell tip growth | AT3G13870 |
| GO:0009832 | ISO | PLAZA Integrative Orthology | plant-type cell wall biogenesis | AT3G13870 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0003924 | IBA | GOA Database | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005783 | IBA IEA | GOA Database | endoplasmic reticulum | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G13870 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G13870 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G13870 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008803 | RHD3/Sey1 |
| Mapman id | Description |
|---|---|
| 13.4.5.2 | Cell cycle organisation.cytokinesis.endoplasmic reticulum (ER) reorganisation.ER tubulae formation factor (RHD3/RL) |