Gene: Solyc12g044880.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g044880.2
- Transcript Identifier Solyc12g044880.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 59884709-59890723 : positive
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g044880.2.1
- uniprot P48980
- gene_id Solyc12g044880
Descriptions
- Description ss-galactosidase, clone tEG1B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | GOA Database | carbohydrate binding | |
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004565 | IBA IEA | GOA Database | beta-galactosidase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | IBA | GOA Database | cell wall | |
| GO:0005773 | IBA | GOA Database | vacuole |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |