Gene: Solyc12g035790.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g035790.2
  • Transcript Identifier Solyc12g035790.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 43169150-43171702 : positive

Gene Family Information

  • ID HOM05D085242
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D480787
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g035790.2.1
  • uniprot K4DE36
  • gene_id Solyc12g035790

Descriptions

  • Description Protein Ycf2 (AHRD V3.3 *-* A0A2H4YME4_9ERIC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008543 Uncharacterised protein family Ycf2
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR007642 RNA polymerase Rpb2, domain 2
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
Mapman id Description
23.1.3.4.2 Protein translocation.chloroplast.inner envelope TIC translocation system.AAA-ATPase motor complex.regulatory component YCF2