Gene: Solyc12g035360.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g035360.2
  • Transcript Identifier Solyc12g035360.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 38583594-38600229 : positive

Gene Family Information

  • ID HOM05D002668
  • #Genes/#Species 257/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g035360.2.1
  • uniprot A0A3Q7J7D8
  • gene_id Solyc12g035360

Descriptions

  • Description WD40 repeat (AHRD V3.3 *** A0A200RDM3_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080182
IBA
GOA Databasehistone H3-K4 trimethylation
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G14530
GO:0048586
ISO
PLAZA Integrative Orthologyregulation of long-day photoperiodism, flowering AT5G14530
GO:0016571
ISO
PLAZA Integrative Orthologyhistone methylation AT5G14530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003682
IBA
GOA Databasechromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048188
IBA
GOA DatabaseSet1C/COMPASS complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G14530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
35.1 not assigned.annotated