Gene: Solyc12g019890.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g019890.2
- Transcript Identifier Solyc12g019890.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 12233651-12236648 : negative
Gene Family Information
- ID HOM05D000417
- #Genes/#Species 1223/97
- Phylogenetic origin
- ID ORTHO05D000342
- #Genes/#Species 1081/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc12g019890.2.1
- uniprot A0A3Q7J641
- gene_id Solyc12g019890
Descriptions
- Description Glucan endo-1,3-beta-glucosidase 5 (AHRD V3.3 *** A0A1U8GB40_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0009832 | ISO | PLAZA Integrative Orthology | plant-type cell wall biogenesis | AT2G19440 |
| GO:0009664 | ISO | PLAZA Integrative Orthology | plant-type cell wall organization | AT1G64760 |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0006952 | IEA | GOA Database | defense response |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0052861 | ISO | PLAZA Integrative Orthology | glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group | AT1G64760 |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0042973 | IEA | GOA Database | glucan endo-1,3-beta-D-glucosidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT2G19440 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G19440 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G64760 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G64760 |
| GO:0046658 | IBA | GOA Database | anchored component of plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.3.2 | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase |