Gene: Solyc12g008840.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g008840.2
  • Transcript Identifier Solyc12g008840.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 2232536-2239011 : positive

Gene Family Information

  • ID HOM05D000140
  • #Genes/#Species 2610/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g008840.2.1
  • uniprot A0A3Q7J3R3
  • gene_id Solyc12g008840

Descriptions

  • Description beta-galactosidase 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004565
IBA
IEA
GOA Databasebeta-galactosidase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0030246
ISO
PLAZA Homology (enrichment)carbohydrate binding HOM05D000140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IBA
GOA Databasecell wall
GO:0005773
IBA
GOA Databasevacuole
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT3G52840
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT3G52840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031330 Glycoside hydrolase 35, catalytic domain
IPR001944 Glycoside hydrolase, family 35
IPR017853 Glycoside hydrolase superfamily
IPR008979 Galactose-binding-like domain superfamily
IPR041392 Beta-galactosidase, beta-sandwich domain
Mapman id Description
21.3.2.2.3 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL)