Gene: Solyc12g006980.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g006980.2
- Transcript Identifier Solyc12g006980.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 1419207-1421390 : positive
Gene Family Information
- ID HOM05D000546
- #Genes/#Species 1000/94
- Phylogenetic origin
- ID ORTHO05D000398
- #Genes/#Species 998/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc12g006980.2.1
- gene_id Solyc12g006980
Descriptions
- Description Leucine-rich repeat family protein (AHRD V3.3 *-* A0A061GNA0_THECC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G13340 |
| GO:0042277 | ISO | PLAZA Integrative Orthology | peptide binding | AT4G13340 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G24480 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G24480 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT3G24480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| Mapman id | Description |
|---|---|
| 21.4.1.3.2 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.extensin activities.LRR-domain extensin |