Gene: Solyc12g005660.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc12g005660.2
- Transcript Identifier Solyc12g005660.2.1
- Gene Type Coding gene
- Location SL4.0ch12 : 364178-364867 : negative
Gene Family Information
- ID HOM05D001117
- #Genes/#Species 550/94
- Phylogenetic origin
- ID ORTHO05D000930
- #Genes/#Species 548/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc12g005660.2.1
- uniprot G8Z284
- gene_id Solyc12g005660
Descriptions
- Description Zinc finger protein/CONSTANS-like protein (AHRD V3.3 *-* A0A2K3M573_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G54470 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT4G27310 |
| GO:0090351 | ISO | PLAZA Integrative Orthology | seedling development | AT4G27310 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT4G27310 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT5G54470 |
| GO:0010100 | ISO | PLAZA Integrative Orthology | negative regulation of photomorphogenesis | AT4G27310 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G27310 |
| GO:0003712 | ISO | PLAZA Integrative Orthology | transcription coregulator activity | AT4G27310 |
| GO:0061629 | ISO | PLAZA Integrative Orthology | RNA polymerase II-specific DNA-binding transcription factor binding | AT4G27310 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G54470 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G27310 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000315 | B-box-type zinc finger |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |