Gene: Solyc12g005630.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g005630.2
  • Transcript Identifier Solyc12g005630.2.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 347197-349561 : negative

Gene Family Information

  • ID HOM05D004713
  • #Genes/#Species 155/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g005630.2.1
  • uniprot A0A3Q7J1M0
  • gene_id Solyc12g005630

Descriptions

  • Description Cytochrome b6-f complex iron-sulfur subunit (AHRD V3.3 *** A0A1U8G0H9_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009767
ISO
PLAZA Integrative Orthologyphotosynthetic electron transport chain AT4G03280
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT4G03280
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G03280
GO:0010196
ISO
PLAZA Integrative Orthologynonphotochemical quenching AT4G03280
GO:0022900
IEA
GOA Databaseelectron transport chain
GO:0055085
IEA
GOA Databasetransmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IBA
GOA Databaseoxidoreductase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G03280
GO:0046028
ISO
PLAZA Integrative Orthologyelectron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity AT4G03280
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G03280
GO:0051537
IEA
GOA Database2 iron, 2 sulfur cluster binding
GO:0051537
IEA
InterPro2 iron, 2 sulfur cluster binding
GO:0045158
IEA
GOA Databaseelectron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0009496
IEA
GOA Databaseplastoquinol--plastocyanin reductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT4G03280
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G03280
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT4G03280
GO:0009512
ISO
PLAZA Integrative Orthologycytochrome b6f complex AT4G03280
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G03280
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily
IPR017941 Rieske [2Fe-2S] iron-sulphur domain
IPR014349 Rieske iron-sulphur protein
IPR005805 Rieske iron-sulphur protein, C-terminal
Mapman id Description
1.1.2.3 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC