Gene: Solyc11g011930.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g011930.3
  • Transcript Identifier Solyc11g011930.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 4914713-4920590 : negative

Gene Family Information

  • ID HOM05D001485
  • #Genes/#Species 428/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g011930.3.1
  • uniprot A0A3Q7IRR8
  • gene_id Solyc11g011930

Descriptions

  • Description Isocitrate dehydrogenase (AHRD V3.3 *** A0A2G2VDF5_CAPBA)
  • Note Isocitrate dehydrogenase [NADP] (AHRD V3.3 *** A0A2G2VDF5_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006102
IBA
IEA
GOA Databaseisocitrate metabolic process
GO:0006102
IEA
InterProisocitrate metabolic process
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G65930
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G65930
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT1G65930
GO:0006739
IBA
GOA DatabaseNADP metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G65930
GO:0016616
IEA
GOA Databaseoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0004450
IBA
IEA
GOA Databaseisocitrate dehydrogenase (NADP+) activity
GO:0004450
IEA
InterProisocitrate dehydrogenase (NADP+) activity
GO:0000287
IEA
GOA Databasemagnesium ion binding
GO:0051287
IEA
GOA DatabaseNAD binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G65930
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G65930
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G65930
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G65930
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G54340
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G65930
GO:0005739
IBA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024084 Isopropylmalate dehydrogenase-like domain
IPR004790 Isocitrate dehydrogenase NADP-dependent
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor