Gene: Solyc11g008420.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g008420.3
  • Transcript Identifier Solyc11g008420.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 2644310-2644879 : negative

Gene Family Information

  • ID HOM05D000212
  • #Genes/#Species 1878/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g008420.3.1
  • uniprot A0A3Q7IRG1
  • gene_id Solyc11g008420

Descriptions

  • Description SKP1-like protein (AHRD V3.3 *** A0A2K3JJY8_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0031146
IBA
GOA DatabaseSCF-dependent proteasomal ubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097602
IBA
GOA Databasecullin family protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016072 SKP1 component, dimerisation
IPR036296 SKP1-like, dimerisation domain superfamily
IPR016073 SKP1 component, POZ domain
IPR011333 SKP1/BTB/POZ domain superfamily
IPR001232 S-phase kinase-associated protein 1-like
IPR016897 S-phase kinase-associated protein 1
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1