Gene: Solyc11g005730.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005730.3
  • Transcript Identifier Solyc11g005730.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 591771-595754 : positive

Gene Family Information

  • ID HOM05D002415
  • #Genes/#Species 281/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005730.3.1
  • uniprot A0A3Q7INP1
  • gene_id Solyc11g005730

Descriptions

  • Description Histone-lysine N-methyltransferase ATXR5 (AHRD V3.3 *** A0A2G2VFH7_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IBA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G09790
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G09790
GO:0006275
ISO
PLAZA Integrative Orthologyregulation of DNA replication AT5G09790
GO:0051726
ISO
PLAZA Integrative Orthologyregulation of cell cycle AT5G09790
GO:0070734
ISO
PLAZA Integrative Orthologyhistone H3-K27 methylation AT5G09790

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0042393
IBA
GOA Databasehistone binding
GO:0046976
ISO
PLAZA Integrative Orthologyhistone methyltransferase activity (H3-K27 specific) AT5G09790

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G09790
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G09790

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001214 SET domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
IPR001965 Zinc finger, PHD-type
Mapman id Description
12.3.3.5 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-IV histone methyltransferase (ATXR)