Gene: Solyc10g080540.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g080540.2
- Transcript Identifier Solyc10g080540.2.1
- Gene Type Coding gene
- Location SL4.0ch10 : 60894709-60897643 : positive
Gene Family Information
- ID HOM05D000393
- #Genes/#Species 1261/97
- Phylogenetic origin
- ID ORTHO05D000275
- #Genes/#Species 1223/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc10g080540.2.1
- uniprot A0A3Q7JFH0
- gene_id Solyc10g080540
Descriptions
- Description Homeobox-leucine zipper protein HOX27 (AHRD V3.3 *** A0A2G3BH29_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006357 | IEA | GOA Database | regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0000981 | IEA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G06710 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.3.1 | RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II) |