Gene: Solyc10g055580.2
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g055580.2
- Transcript Identifier Solyc10g055580.2.1
- Gene Type Coding gene
- Location SL4.0ch10 : 56077142-56079351 : positive
Gene Family Information
- ID HOM05D000212
- #Genes/#Species 1878/99
- Phylogenetic origin
- ID ORTHO05D000225
- #Genes/#Species 1348/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc10g055580.2.1
- uniprot A0A3Q7IHU4
- gene_id Solyc10g055580
Descriptions
- Description SKP1-like protein (AHRD V3.3 *** O82463_NICCL)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006511 | IEA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0006511 | IEA | InterPro | ubiquitin-dependent protein catabolic process | |
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0031146 | IBA | GOA Database | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0097602 | IBA IEA | GOA Database | cullin family protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.8.1.2 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1 |