Gene: Solyc10g049750.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc10g049750.3
Transcript Identifier Solyc10g049750.3.1
Gene Type Coding gene
Location SL4.0ch10 : 45561675-45571035 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000515
#Genes/#Species 1048/100
Phylogenetic origin

ID ORTHO05D003530
#Genes/#Species 218/94
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Solyc10g049750.3.1
uniprot A0A3Q7IGP1
gene_id Solyc10g049750

Descriptions

Short descriptions
Ortholog descriptions

Description SNF2-related (AHRD V3.3 *** A0A200QH53_9MAGN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0046872	IEA	GOA Database	metal ion binding
GO:0046872	IEA	InterPro	metal ion binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0070615	IEA	GOA Database	nucleosome-dependent ATPase activity
GO:0070615	IEA	InterPro	nucleosome-dependent ATPase activity
GO:0000166	IEA	GOA Database	nucleotide binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001650	Helicase, C-terminal
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR038718	SNF2-like, N-terminal domain superfamily
IPR001841	Zinc finger, RING-type
IPR018957	Zinc finger, C3HC4 RING-type
IPR000330	SNF2, N-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
12.4.8.3.2	Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like)