Gene: Solyc10g008880.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc10g008880.3
- Transcript Identifier Solyc10g008880.3.1
- Gene Type Coding gene
- Location SL4.0ch10 : 2798356-2801021 : negative
Gene Family Information
- ID HOM05D002520
- #Genes/#Species 269/93
- Phylogenetic origin
- ID ORTHO05D003144
- #Genes/#Species 242/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc10g008880.3.1
- uniprot A0A3Q7J701
- gene_id Solyc10g008880
Descriptions
- Description Zinc finger transcription factor 56
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048578 | IBA IEA | GOA Database | positive regulation of long-day photoperiodism, flowering | |
| GO:0048578 | IEA | InterPro | positive regulation of long-day photoperiodism, flowering | |
| GO:0045893 | IBA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G28520 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT2G42400 |
| GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | AT2G42400 |
| GO:0009631 | ISO | PLAZA Integrative Orthology | cold acclimation | AT1G28520 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G28520 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G28520 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | IBA | GOA Database | sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G42400 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G42400 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039277 | Transcription factor VOZ1/VOZ2 |
| Mapman id | Description |
|---|---|
| 15.5.34 | RNA biosynthesis.transcriptional regulation.transcription factor (VOZ) |