Gene: Solyc09g092440.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g092440.1
  • Transcript Identifier Solyc09g092440.1.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 67637630-67639462 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g092440.1.1
  • uniprot A0A3Q7J4G1
  • gene_id Solyc09g092440

Descriptions

  • Description Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q5C6_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT4G14050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.3.3.4.25 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (MEF35)