Gene: Solyc09g064300.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g064300.1
  • Transcript Identifier Solyc09g064300.1.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 57581264-57581632 : negative

Gene Family Information

  • ID HOM05D000327
  • #Genes/#Species 1418/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g064300.1.1
  • uniprot K4CU60
  • gene_id Solyc09g064300

Descriptions

  • Description RBR-type E3 ubiquitin transferase (AHRD V3.3 *-* A0A2G3AGY9_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0000151
IBA
GOA Databaseubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031127 E3 ubiquitin ligase RBR family
IPR002867 IBR domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.2 not assigned.not annotate