Gene: Solyc09g061620.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc09g061620.3
- Transcript Identifier Solyc09g061620.3.1
- Gene Type Coding gene
- Location SL4.0ch09 : 56184630-56188722 : positive
Gene Family Information
- ID HOM05D000407
- #Genes/#Species 1240/100
- Phylogenetic origin
- ID ORTHO05D000558
- #Genes/#Species 789/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc09g061620.3.1
- uniprot A0A3Q7I4I8
- gene_id Solyc09g061620
Descriptions
- Description Vesicle-associated membrane protein (AHRD V3.3 *** A0A1U8H291_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0072659 | ISO | PLAZA Integrative Orthology | protein localization to plasma membrane | AT1G04750 |
| GO:0034976 | ISO | PLAZA Integrative Orthology | response to endoplasmic reticulum stress | AT1G04750 |
| GO:0009920 | ISO | PLAZA Integrative Orthology | cell plate formation involved in plant-type cell wall biogenesis | AT1G04750 |
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT2G33120 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G04750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT2G32670 |
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT1G04750 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G32670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.4.2.3.4 | Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.R-SNARE component VAMP721/VAMP722 |
| 22.3.5.1.5.1 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.VAMP7-group component |