Gene: Solyc09g011970.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc09g011970.3
- Transcript Identifier Solyc09g011970.3.1
- Gene Type Coding gene
- Location SL4.0ch09 : 5287208-5291261 : positive
Gene Family Information
- ID HOM05D000080
- #Genes/#Species 3730/98
- Phylogenetic origin
- ID ORTHO05D000053
- #Genes/#Species 2731/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc09g011970.3.1
- uniprot A0A3Q7IUX9
- gene_id Solyc09g011970
Descriptions
- Description Laccase (AHRD V3.3 *** K4CRM2_SOLLC)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046274 | IEA | GOA Database | lignin catabolic process | |
| GO:0046274 | IEA | InterPro | lignin catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IEA | GOA Database | copper ion binding | |
| GO:0005507 | IEA | InterPro | copper ion binding | |
| GO:0052716 | IEA | GOA Database | hydroquinone:oxygen oxidoreductase activity | |
| GO:0052716 | IEA | InterPro | hydroquinone:oxygen oxidoreductase activity | |
| GO:0016491 | IBA IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0048046 | IEA | InterPro | apoplast | |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0048226 | ISO | PLAZA Integrative Orthology | Casparian strip | AT1G18140 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034288 | Laccase, first cupredoxin domain |
| IPR008972 | Cupredoxin |
| IPR017761 | Laccase |
| IPR034285 | Laccase, second cupredoxin domain |
| IPR045087 | Multicopper oxidase |
| IPR011707 | Multicopper oxidase, N-termianl |
| IPR001117 | Multicopper oxidase, type 1 |
| IPR034289 | Laccase, third cupredoxin domain |
| IPR011706 | Multicopper oxidase, C-terminal |
| Mapman id | Description |
|---|---|
| 21.6.2.2 | Cell wall organisation.lignin.monolignol conjugation and polymerization.lignin laccase |