Gene: Solyc08g083350.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g083350.4
- Transcript Identifier Solyc08g083350.4.1
- Gene Type Coding gene
- Location SL4.0ch08 : 63975201-63977575 : positive
Gene Family Information
- ID HOM05D002532
- #Genes/#Species 268/100
- Phylogenetic origin
- ID ORTHO05D008197
- #Genes/#Species 122/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g083350.4.1
- uniprot A0A3Q7HVF7
- gene_id Solyc08g083350
Descriptions
- Description 50S ribosomal protein L11, chloroplastic (AHRD V3.3 *** A0A2G3AD25_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IBA IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070180 | IBA | GOA Database | large ribosomal subunit rRNA binding | |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0019843 | IEA | GOA Database | rRNA binding | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G32990 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT1G32990 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G32990 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G32990 |
| GO:0015934 | IBA | GOA Database | large ribosomal subunit | |
| GO:0022625 | IBA | GOA Database | cytosolic large ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036796 | Ribosomal protein L11/L12, N-terminal domain superfamily |
| IPR000911 | Ribosomal protein L11/L12 |
| IPR020783 | Ribosomal protein L11, C-terminal |
| IPR036769 | Ribosomal protein L11, C-terminal domain superfamily |
| IPR006519 | Ribosomal protein L11, bacterial-type |
| IPR020784 | Ribosomal protein L11, N-terminal |
| Mapman id | Description |
|---|---|
| 17.7.2.1.9 | Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL11 |