Gene: Solyc08g080890.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g080890.3
- Transcript Identifier Solyc08g080890.3.1
- Gene Type Coding gene
- Location SL4.0ch08 : 62184259-62187416 : positive
Gene Family Information
- ID HOM05D000343
- #Genes/#Species 1379/99
- Phylogenetic origin
- ID ORTHO05D000975
- #Genes/#Species 533/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc08g080890.3.1
- uniprot A0A3Q7HW08
- gene_id Solyc08g080890
Descriptions
- Description E1-E2_ATPase domain-containing protein/HMA domain-containing protein/Hydrolase domain-containing protein (AHRD V3.3 *** A0A1Q3AQK6_CEPFO)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046688 | ISO | PLAZA Integrative Orthology | response to copper ion | AT1G63440 |
| GO:0010273 | ISO | PLAZA Integrative Orthology | detoxification of copper ion | AT1G63440 |
| GO:0006812 | IEA | GOA Database | cation transport | |
| GO:0006812 | IEA | InterPro | cation transport | |
| GO:0034220 | IEA | GOA Database | ion transmembrane transport | |
| GO:0098655 | IEA | GOA Database | cation transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005507 | IEA | GOA Database | copper ion binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0019829 | IEA | GOA Database | ATPase-coupled cation transmembrane transporter activity | |
| GO:0019829 | IEA | InterPro | ATPase-coupled cation transmembrane transporter activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0005215 | IEA | InterPro | transporter activity | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001757 | P-type ATPase |
| IPR006121 | Heavy metal-associated domain, HMA |
| IPR027256 | P-type ATPase, subfamily IB |
| IPR008250 | P-type ATPase, A domain superfamily |
| IPR044492 | P-type ATPase, haloacid dehalogenase domain |
| IPR023214 | HAD superfamily |
| IPR023299 | P-type ATPase, cytoplasmic domain N |
| IPR036163 | Heavy metal-associated domain superfamily |
| IPR036412 | HAD-like superfamily |
| IPR023298 | P-type ATPase, transmembrane domain superfamily |
| Mapman id | Description |
|---|---|
| 24.1.2.1.1 | Solute transport.primary active transport.P-type ATPase superfamily.P1 family.P1B-type heavy metal cation-transporting ATPase (HMA) |