Gene: Solyc08g080250.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g080250.4
- Transcript Identifier Solyc08g080250.4.1
- Gene Type Coding gene
- Location SL4.0ch08 : 61674712-61677216 : positive
Gene Family Information
- ID HOM05D001198
- #Genes/#Species 522/96
- Phylogenetic origin
- ID ORTHO05D001599
- #Genes/#Species 383/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g080250.4.1
- uniprot A0A3Q7HVP1
- gene_id Solyc08g080250
Descriptions
- Description APO protein 1, chloroplastic (AHRD V3.3 *** A0A2G2XKE1_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | AT1G64810 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT1G64810 |
| GO:0015979 | ISO | PLAZA Integrative Orthology | photosynthesis | AT1G64810 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G64810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IBA IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT1G64810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G64810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023342 | APO domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |