Gene: Solyc08g080080.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g080080.4
  • Transcript Identifier Solyc08g080080.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 61516018-61519881 : positive

Gene Family Information

  • ID HOM05D000526
  • #Genes/#Species 1037/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g080080.4.1
  • uniprot A0A3Q7IPR3
  • gene_id Solyc08g080080

Descriptions

  • Description WD40 repeat (AHRD V3.3 *** A0A200PPM9_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032877
ISO
PLAZA Integrative Orthologypositive regulation of DNA endoreduplication AT4G11920
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT4G22910
GO:0042023
ISO
PLAZA Integrative OrthologyDNA endoreduplication AT4G22910
GO:0008361
ISO
PLAZA Integrative Orthologyregulation of cell size AT4G11920
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT4G22910
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity AT4G11920
GO:1905786
IBA
GOA Databasepositive regulation of anaphase-promoting complex-dependent catabolic process
GO:0031145
IBA
GOA Databaseanaphase-promoting complex-dependent catabolic process
GO:1904668
IEA
GOA Databasepositive regulation of ubiquitin protein ligase activity
GO:1904668
IEA
InterPropositive regulation of ubiquitin protein ligase activity
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990757
IBA
GOA Databaseubiquitin ligase activator activity
GO:0005515
IEA
InterProprotein binding
GO:0010997
IBA
IEA
GOA Databaseanaphase-promoting complex binding
GO:0010997
IEA
InterProanaphase-promoting complex binding
GO:0097027
IEA
GOA Databaseubiquitin-protein transferase activator activity
GO:0097027
IEA
InterProubiquitin-protein transferase activator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G11920
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G11920
GO:0005680
IBA
GOA Databaseanaphase-promoting complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR033010 The WD repeat Cdc20/Fizzy family
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
13.3.3.1.3 Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.activator protein (FZR)