Gene: Solyc08g078640.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g078640.3
  • Transcript Identifier Solyc08g078640.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 60509413-60513453 : negative

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g078640.3.1
  • uniprot A0A3Q7HSB2
  • gene_id Solyc08g078640

Descriptions

  • Description Pectinesterase (AHRD V3.3 *** A0A2G3DBT2_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
GOA Databasecell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0006486
IEA
GOA Databaseprotein glycosylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IEA
InterPropectinesterase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0016757
IBA
IEA
GOA Databaseglycosyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
IPR000070 Pectinesterase, catalytic
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase