Gene: Solyc08g075490.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g075490.4
- Transcript Identifier Solyc08g075490.4.1
- Gene Type Coding gene
- Location SL4.0ch08 : 57756710-57759126 : negative
Gene Family Information
- ID HOM05D000433
- #Genes/#Species 1194/98
- Phylogenetic origin
- ID ORTHO05D000443
- #Genes/#Species 921/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc08g075490.4.1
- uniprot A0A3Q7HT55
- gene_id Solyc08g075490
Descriptions
- Description 9-cis-epoxycarotenoid dioxygenase (AHRD V3.3 *** A0A193PR95_9LILI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016121 | IBA | GOA Database | carotene catabolic process | |
| GO:1901811 | ISO | PLAZA Integrative Orthology | beta-carotene catabolic process | AT4G19170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016702 | IEA | GOA Database | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0016702 | IEA | InterPro | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0051213 | IEA | GOA Database | dioxygenase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0010436 | IBA | GOA Database | carotenoid dioxygenase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G19170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | IBA | GOA Database | chloroplast stroma | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G19170 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | AT4G19170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004294 | Carotenoid oxygenase |
| Mapman id | Description |
|---|---|
| 9.1.6.3.2 | Secondary metabolism.terpenoids.carotenoid biosynthesis.apocarotenoids.class-CCD4 carotenoid cleavage dioxygenase |