Gene: Solyc08g067880.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g067880.4
- Transcript Identifier Solyc08g067880.4.1
- Gene Type Coding gene
- Location SL4.0ch08 : 55030199-55032358 : negative
Gene Family Information
- ID HOM05D002602
- #Genes/#Species 262/94
- Phylogenetic origin
- ID ORTHO05D002661
- #Genes/#Species 272/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc08g067880.4.1
- uniprot A0A3Q7HPI9
- gene_id Solyc08g067880
Descriptions
- Description hypothetical protein (AHRD V3.3 *-* AT2G25670.2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IBA | GOA Database | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017070 | IBA | GOA Database | U6 snRNA binding | |
| GO:0030621 | IBA | GOA Database | U4 snRNA binding | |
| GO:0005507 | ISO | PLAZA Integrative Orthology | copper ion binding | AT4G32610 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G25670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046540 | IBA | GOA Database | U4/U6 x U5 tri-snRNP complex | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G25670 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |