Gene: Solyc08g023440.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc08g023440.3
- Transcript Identifier Solyc08g023440.3.1
- Gene Type Coding gene
- Location SL4.0ch08 : 27641557-27646959 : positive
Gene Family Information
- ID HOM05D000321
- #Genes/#Species 1447/100
- Phylogenetic origin
- ID ORTHO05D000204
- #Genes/#Species 1402/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc08g023440.3.1
- uniprot A0A3Q7IGW5
- gene_id Solyc08g023440
Descriptions
- Description Early-responsive to dehydration stress protein (ERD4) (AHRD V3.3 *** A0A2U1KBS2_ARTAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0098655 | IEA | GOA Database | cation transmembrane transport | |
| GO:0034220 | IEA | GOA Database | ion transmembrane transport | |
| GO:0006811 | IEA | GOA Database | ion transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005227 | IBA IEA | GOA Database | calcium activated cation channel activity | |
| GO:0005227 | IEA | InterPro | calcium activated cation channel activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G30360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005886 | IBA | GOA Database | plasma membrane | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G30360 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G30360 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G30360 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G30360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032880 | Calcium permeable stress-gated cation channel 1, N-terminal transmembrane domain |
| IPR003864 | Calcium-dependent channel, 7TM region, putative phosphate |
| IPR027815 | 10TM putative phosphate transporter, cytosolic domain |
| IPR045122 | Calcium permeable stress-gated cation channel 1-like |
| Mapman id | Description |
|---|---|
| 24.3.7 | Solute transport.channels.calcium-permeable channel (OSCA) |