Gene: Solyc08g008590.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g008590.4
  • Transcript Identifier Solyc08g008590.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 2966707-2971289 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g008590.4.1
  • uniprot K4B017
  • gene_id Solyc08g008590

Descriptions

  • Description Ubiquitin (AHRD V3.3 *-* K2RHN1_MACPH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation
GO:0019941
IBA
GOA Databasemodification-dependent protein catabolic process
GO:0016567
IBA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003735
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0031386
IBA
GOA Databaseprotein tag
GO:0031625
IBA
GOA Databaseubiquitin protein ligase binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005737
IBA
IEA
GOA Databasecytoplasm
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000626 Ubiquitin-like domain
IPR001975 Ribosomal protein L40e
IPR019956 Ubiquitin domain
IPR029071 Ubiquitin-like domain superfamily
IPR038587 Ribosomal protein L40e superfamily
IPR011332 Zinc-binding ribosomal protein
Mapman id Description
17.1.2.1.43 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL40