Gene: Solyc07g054170.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc07g054170.3
- Transcript Identifier Solyc07g054170.3.1
- Gene Type Coding gene
- Location SL4.0ch07 : 62451877-62454758 : positive
Gene Family Information
- ID HOM05D000383
- #Genes/#Species 1279/94
- Phylogenetic origin
- ID ORTHO05D000730
- #Genes/#Species 648/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc07g054170.3.1
- uniprot A0A3Q7HCJ2
- gene_id Solyc07g054170
Descriptions
- Description Expansin-B1 (AHRD V3.3 *** A0A1U8HBL3_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019953 | IEA | GOA Database | sexual reproduction | |
| GO:0019953 | IEA | InterPro | sexual reproduction | |
| GO:0006949 | IBA | GOA Database | syncytium formation |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005576 | IEA | InterPro | extracellular region | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0009506 | IBA | GOA Database | plasmodesma |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007112 | Expansin/pollen allergen, DPBB domain |
| IPR007117 | Expansin, cellulose-binding-like domain |
| IPR036749 | Expansin, cellulose-binding-like domain superfamily |
| IPR009009 | RlpA-like protein, double-psi beta-barrel domain |
| IPR007118 | Expansin/Lol pI |
| IPR005795 | Major pollen allergen Lol pI |
| IPR036908 | RlpA-like domain superfamily |
| Mapman id | Description |
|---|---|
| 21.4.2.3 | Cell wall organisation.cell wall proteins.expansin activities.beta-class expansin |