Gene: Solyc06g084020.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g084020.4
- Transcript Identifier Solyc06g084020.4.1
- Gene Type Coding gene
- Location SL4.0ch06 : 46860095-46860988 : negative
Gene Family Information
- ID HOM05D001085
- #Genes/#Species 565/98
- Phylogenetic origin
- ID ORTHO05D000895
- #Genes/#Species 566/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g084020.4.1
- uniprot A0A3Q7H585
- gene_id Solyc06g084020
Descriptions
- Description histone H1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045910 | IBA | GOA Database | negative regulation of DNA recombination | |
| GO:0030261 | IBA | GOA Database | chromosome condensation | |
| GO:0016584 | IBA | GOA Database | nucleosome positioning | |
| GO:0031936 | IBA | GOA Database | negative regulation of chromatin silencing | |
| GO:0006334 | IEA | GOA Database | nucleosome assembly | |
| GO:0006334 | IEA | InterPro | nucleosome assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031492 | IBA | GOA Database | nucleosomal DNA binding | |
| GO:0003690 | IBA | GOA Database | double-stranded DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G30620 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT2G30620 |
| GO:0005634 | IBA IEA | GOA Database | nucleus | |
| GO:0000786 | IEA | GOA Database | nucleosome | |
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005694 | IEA | GOA Database | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.2.1 | Chromatin organisation.chromatin structure.DNA bridging.linker histone (H1) |