Gene: Solyc06g075370.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g075370.3
- Transcript Identifier Solyc06g075370.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 44453858-44455458 : negative
Gene Family Information
- ID HOM05D000110
- #Genes/#Species 3051/96
- Phylogenetic origin
- ID ORTHO05D000024
- #Genes/#Species 3751/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g075370.3.1
- uniprot A0A3Q7H0C2
- gene_id Solyc06g075370
Descriptions
- Description Dof zinc finger protein (AHRD V3.3 *** A0A2K3LIE4_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT5G60200 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT4G21050 |
| GO:0010087 | ISO | PLAZA Integrative Orthology | phloem or xylem histogenesis | AT5G60200 |
| GO:2000032 | ISO | PLAZA Integrative Orthology | regulation of secondary shoot formation | AT4G21050 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT4G21050 |
| GO:0090057 | ISO | PLAZA Integrative Orthology | root radial pattern formation | AT3G45610 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT2G28510 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G45610 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G28510 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |