Gene: Solyc06g068840.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g068840.3
  • Transcript Identifier Solyc06g068840.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 40290556-40301288 : negative

Gene Family Information

  • ID HOM05D001469
  • #Genes/#Species 431/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g068840.3.1
  • uniprot A0A3Q7H069
  • gene_id Solyc06g068840

Descriptions

  • Description Calcium-dependent phospholipid-binding Copine family protein (AHRD V3.3 *** A0A2U1NDK1_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071277
IBA
GOA Databasecellular response to calcium ion
GO:0019725
ISO
PLAZA Integrative Orthologycellular homeostasis AT5G61900
GO:0009270
ISO
PLAZA Integrative Orthologyresponse to humidity AT5G61900
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT5G61900
GO:0045793
ISO
PLAZA Integrative Orthologypositive regulation of cell size AT5G61900
GO:0090332
ISO
PLAZA Integrative Orthologystomatal closure AT1G08860
GO:0060548
ISO
PLAZA Integrative Orthologynegative regulation of cell death AT1G08860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005544
IBA
IEA
GOA Databasecalcium-dependent phospholipid binding
GO:0005544
IEA
InterProcalcium-dependent phospholipid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G07300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G07300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035892 C2 domain superfamily
IPR010734 Copine, C-terminal
IPR002035 von Willebrand factor, type A
IPR045052 Copine
IPR000008 C2 domain
IPR036465 von Willebrand factor A-like domain superfamily
IPR037768 Copine, C2B domain
Mapman id Description
27.2.5 Multi-process regulation.Programmed Cell Death (PCD) system.PCD suppressor (BON)