Gene: Solyc06g068640.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g068640.3
- Transcript Identifier Solyc06g068640.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 40191242-40191943 : negative
Gene Family Information
- ID HOM05D000327
- #Genes/#Species 1418/97
- Phylogenetic origin
- ID ORTHO05D000218
- #Genes/#Species 1364/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g068640.3.1
- uniprot A0A3Q7GXU6
- gene_id Solyc06g068640
Descriptions
- Description RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8H0T0_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016567 | IEA | GOA Database | protein ubiquitination | |
GO:0016567 | IEA | InterPro | protein ubiquitination | |
GO:0006511 | IBA | GOA Database | ubiquitin-dependent protein catabolic process | |
GO:0032436 | IBA | GOA Database | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | |
GO:0000209 | IBA | GOA Database | protein polyubiquitination |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004842 | IEA | GOA Database | ubiquitin-protein transferase activity | |
GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding | |
GO:0016740 | IEA | GOA Database | transferase activity | |
GO:0061630 | IBA | GOA Database | ubiquitin protein ligase activity | |
GO:0031624 | IBA | GOA Database | ubiquitin conjugating enzyme binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000151 | IBA | GOA Database | ubiquitin ligase complex | |
GO:0005737 | IBA | GOA Database | cytoplasm |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
19.2.2.1.4.4.4 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA) |