Gene: Solyc06g062690.4

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc06g062690.4
Transcript Identifier Solyc06g062690.4.1
Gene Type Coding gene
Location SL4.0ch06 : 37221409-37225176 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001215
#Genes/#Species 514/98
Phylogenetic origin

ID ORTHO05D001387
#Genes/#Species 418/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Solyc06g062690.4.1
uniprot A0A3Q7GY01
gene_id Solyc06g062690

Descriptions

Short descriptions
Ortholog descriptions

Description Nucleosome assembly protein family (AHRD V3.3 *** A9TVZ4_PHYPA)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006334	IBA IEA	GOA Database	nucleosome assembly
GO:0006334	IEA	InterPro	nucleosome assembly
GO:0000724	ISO	PLAZA Integrative Orthology	double-strand break repair via homologous recombination	AT3G13782
GO:0006289	ISO	PLAZA Integrative Orthology	nucleotide-excision repair	AT3G13782
GO:0046686	ISO	PLAZA Integrative Orthology	response to cadmium ion	AT3G13782

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003682	IBA	GOA Database	chromatin binding
GO:0042393	IBA	GOA Database	histone binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G13782

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA IEA	GOA Database	nucleus
GO:0005634	IEA	InterPro	nucleus
GO:0000785	IBA	GOA Database	chromatin
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT3G13782

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002164	Nucleosome assembly protein (NAP)
IPR037231	NAP-like superfamily

Mapman id	Description
12.2.6	Chromatin organisation.histone chaperone activities.histone chaperone (NAP)