Gene: Solyc06g051920.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g051920.4
  • Transcript Identifier Solyc06g051920.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 33366779-33371176 : positive

Gene Family Information

  • ID HOM05D000122
  • #Genes/#Species 2793/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g051920.4.1
  • uniprot A0A3Q7HNZ3
  • gene_id Solyc06g051920

Descriptions

  • Description Cyclic nucleotide gated channel 1 (AHRD V3.3 *** A0A2U1KHS4_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
IEA
GOA Databaseion transport
GO:0006811
IEA
InterProion transport
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0006813
ISO
PLAZA Integrative Orthologypotassium ion transport AT5G53130
GO:0006816
ISO
PLAZA Integrative Orthologycalcium ion transport AT5G53130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IEA
GOA Databaseion channel activity
GO:0005216
IEA
InterProion channel activity
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT5G53130
GO:0005242
ISO
PLAZA Integrative Orthologyinward rectifier potassium channel activity AT5G53130
GO:0005221
ISO
PLAZA Integrative Orthologyintracellular cyclic nucleotide activated cation channel activity AT5G53130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G53130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005821 Ion transport domain
IPR014710 RmlC-like jelly roll fold
IPR000595 Cyclic nucleotide-binding domain
IPR018490 Cyclic nucleotide-binding-like
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)