Gene: Solyc06g049050.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g049050.3
  • Transcript Identifier Solyc06g049050.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 30020274-30021590 : positive

Gene Family Information

  • ID HOM05D000114
  • #Genes/#Species 2914/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g049050.3.1
  • uniprot O82625
  • gene_id Solyc06g049050

Descriptions

  • Description expansin 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009664
IEA
GOA Databaseplant-type cell wall organization
GO:0009664
IEA
InterProplant-type cell wall organization
GO:0071555
IEA
GOA Databasecell wall organization
GO:0006949
ISO
PLAZA Integrative Orthologysyncytium formation AT2G40610
GO:0009635
ISO
PLAZA Integrative Orthologyresponse to herbicide AT2G40610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009009 RlpA-like protein, double-psi beta-barrel domain
IPR036908 RlpA-like domain superfamily
IPR002963 Expansin
IPR007118 Expansin/Lol pI
IPR007117 Expansin, cellulose-binding-like domain
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR007112 Expansin/pollen allergen, DPBB domain
Mapman id Description
21.4.2.1 Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin