Gene: Solyc06g035560.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g035560.3
  • Transcript Identifier Solyc06g035560.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 22330356-22330680 : negative

Gene Family Information

  • ID HOM05D000002
  • #Genes/#Species 26594/98
  • Phylogenetic origin
  • ID ORTHO05D390886
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g035560.3.1
  • uniprot A0A3Q7GTV0
  • gene_id Solyc06g035560

Descriptions

  • Description MADS-box protein AGL42-like isoform X1 (AHRD V3.3 *-* XP_010321999.1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0000977
IEA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
35.2 not assigned.not annotate