Gene: Solyc05g053680.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g053680.1
  • Transcript Identifier Solyc05g053680.1.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 63118868-63122785 : positive

Gene Family Information

  • ID HOM05D000165
  • #Genes/#Species 2272/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g053680.1.1
  • uniprot A0A3Q7HGG4
  • gene_id Solyc05g053680

Descriptions

  • Description Pectinesterase (AHRD V3.3 *** A0A2G2VIL1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
GOA Databasecell wall modification
GO:0042545
IEA
InterProcell wall modification
GO:0045490
IEA
GOA Databasepectin catabolic process
GO:0006412
IEA
GOA Databasetranslation
GO:0017148
IBA
GOA Databasenegative regulation of translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
GOA Databasepectinesterase activity
GO:0030599
IEA
InterPropectinesterase activity
GO:0045330
IEA
GOA Databaseaspartyl esterase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IBA
IEA
GOA Databaseribosome
GO:0015934
IEA
GOA Databaselarge ribosomal subunit
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000070 Pectinesterase, catalytic
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase