Gene: Solyc05g052960.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g052960.4
  • Transcript Identifier Solyc05g052960.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 62523797-62528939 : negative

Gene Family Information

  • ID HOM05D000563
  • #Genes/#Species 981/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g052960.4.1
  • uniprot A0A3Q7GLR5
  • gene_id Solyc05g052960

Descriptions

  • Description BTB/POZ and MATH domain-containing protein (AHRD V3.3 *** A0A2R6PM37_ACTCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT2G39760
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT2G39760
GO:0031396
ISO
PLAZA Integrative Orthologyregulation of protein ubiquitination AT2G39760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT2G39760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G39760
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G39760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034090 BPM, C-terminal
IPR011333 SKP1/BTB/POZ domain superfamily
IPR045005 BTB/POZ and MATH domain-containing protein 1-6
IPR008974 TRAF-like
IPR002083 MATH/TRAF domain
IPR000210 BTB/POZ domain
Mapman id Description
19.2.2.8.2.2.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (BPM)