Gene: Solyc05g050560.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g050560.1
  • Transcript Identifier Solyc05g050560.1.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 60095726-60097465 : positive

Gene Family Information

  • ID HOM05D000567
  • #Genes/#Species 974/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g050560.1.1
  • uniprot A0A3Q7HES4
  • gene_id Solyc05g050560

Descriptions

  • Description Transcription factor bHLH13 (AHRD V3.3 *** A0A2G3B2W8_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031347
IMP
GOA Databaseregulation of defense response
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G46510
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G46510
GO:0010629
ISO
PLAZA Integrative Orthologynegative regulation of gene expression AT2G46510
GO:0006355
IDA
IBA
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:2000022
IMP
GOA Databaseregulation of jasmonic acid mediated signaling pathway
GO:0006952
IEA
GOA Databasedefense response

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G46510
GO:0000976
IBA
GOA Databasetranscription cis-regulatory region binding
GO:0003700
IBA
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G01260
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045084 Transcription factor AIB/MYC-like
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR025610 Transcription factor MYC/MYB N-terminal
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)