Gene: Solyc05g044510.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc05g044510.2
Transcript Identifier Solyc05g044510.2.1
Gene Type Coding gene
Location SL4.0ch05 : 56008122-56014379 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000515
#Genes/#Species 1048/100
Phylogenetic origin

ID ORTHO05D003530
#Genes/#Species 218/94
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc05g044510.2.1
uniprot A0A3Q7GJL6
gene_id Solyc05g044510

Descriptions

Short descriptions
Ortholog descriptions

Description RNA helicase DEAH-box17

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	IDA	Gene Ontology	RNA metabolic process	1

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003724	IDA	Gene Ontology	RNA helicase activity	1
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0070615	IEA	GOA Database	nucleosome-dependent ATPase activity
GO:0070615	IEA	InterPro	nucleosome-dependent ATPase activity
GO:0046872	IEA	GOA Database	metal ion binding
GO:0046872	IEA	InterPro	metal ion binding
GO:0000166	IEA	GOA Database	nucleotide binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001841	Zinc finger, RING-type
IPR000330	SNF2, N-terminal
IPR038718	SNF2-like, N-terminal domain superfamily
IPR001650	Helicase, C-terminal
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR018957	Zinc finger, C3HC4 RING-type

Mapman id	Description
12.4.8.3.2	Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like)