Gene: Solyc05g042180.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g042180.3
- Transcript Identifier Solyc05g042180.3.1
- Gene Type Coding gene
- Location SL4.0ch05 : 54458679-54461239 : negative
Gene Family Information
- ID HOM05D001376
- #Genes/#Species 455/97
- Phylogenetic origin
- ID ORTHO05D004383
- #Genes/#Species 182/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc05g042180.3.1
- uniprot A0A3Q7GH25
- gene_id Solyc05g042180
Descriptions
- Description RNA-binding KH domain-containing protein PEPPER (AHRD V3.3 *-* A0A2G2XN02_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010468 | IBA | GOA Database | regulation of gene expression |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001376 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.2 | not assigned.not annotate |