Gene: Solyc05g013890.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g013890.3
- Transcript Identifier Solyc05g013890.3.1
- Gene Type Coding gene
- Location SL4.0ch05 : 7404800-7406392 : negative
Gene Family Information
- ID HOM05D000068
- #Genes/#Species 3957/100
- Phylogenetic origin
- ID ORTHO05D000084
- #Genes/#Species 2339/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc05g013890.3.1
- uniprot A0A3Q7GD71
- gene_id Solyc05g013890
Descriptions
- Description ABC transporter (AHRD V3.3 *-* A0A200R4I7_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0055085 | IEA | GOA Database | transmembrane transport | |
| GO:0055085 | IEA | InterPro | transmembrane transport | |
| GO:0090374 | IBA | GOA Database | oligopeptide export from mitochondrion |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0140359 | IEA | GOA Database | ABC-type transporter activity | |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0015421 | IBA | GOA Database | ABC-type oligopeptide transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005743 | IBA | GOA Database | mitochondrial inner membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
| IPR039421 | Type 1 protein exporter |
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 24.1.3.1.1 | Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter |