Gene: Solyc05g013820.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g013820.4
  • Transcript Identifier Solyc05g013820.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 7188170-7195492 : negative

Gene Family Information

  • ID HOM05D003110
  • #Genes/#Species 220/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g013820.4.1
  • uniprot A0A3Q7GHJ1
  • gene_id Solyc05g013820

Descriptions

  • Description Proteasome subunit beta (AHRD V3.3 *** A0A2G2VMP0_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051603
IEA
GOA Databaseproteolysis involved in cellular protein catabolic process
GO:0051603
IEA
InterProproteolysis involved in cellular protein catabolic process
GO:0010498
IBA
GOA Databaseproteasomal protein catabolic process
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G40580

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004298
IEA
GOA Databasethreonine-type endopeptidase activity
GO:0004298
IEA
InterProthreonine-type endopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005839
IBA
IEA
GOA Databaseproteasome core complex
GO:0005839
IEA
InterProproteasome core complex
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0000502
IEA
GOA Databaseproteasome complex
GO:0019774
IBA
GOA Databaseproteasome core complex, beta-subunit complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001353 Proteasome, subunit alpha/beta
IPR029055 Nucleophile aminohydrolases, N-terminal
IPR000243 Peptidase T1A, proteasome beta-subunit
Mapman id Description
19.2.5.1.2.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-2