Gene: Solyc04g049670.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g049670.4
  • Transcript Identifier Solyc04g049670.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 42074081-42080411 : negative

Gene Family Information

  • ID HOM05D001073
  • #Genes/#Species 570/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g049670.4.1
  • uniprot A0A3Q7G0T4
  • gene_id Solyc04g049670

Descriptions

  • Description Pseudo-response regulator (AHRD V3.3 *** X5I0R0_IPONI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000160
IEA
GOA Databasephosphorelay signal transduction system
GO:0000160
IEA
InterProphosphorelay signal transduction system
GO:0048511
IEA
GOA Databaserhythmic process
GO:0009266
ISO
PLAZA Integrative Orthologyresponse to temperature stimulus AT5G02810
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G02810
GO:0010017
ISO
PLAZA Integrative Orthologyred or far-red light signaling pathway AT5G02810
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G02810
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering Os07g0695100
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G02810
GO:0042752
ISO
PLAZA Integrative Orthologyregulation of circadian rhythm AT5G60100
GO:0032091
ISO
PLAZA Integrative Orthologynegative regulation of protein binding AT5G60100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G02810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G02810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010402 CCT domain
IPR001789 Signal transduction response regulator, receiver domain
IPR011006 CheY-like superfamily
Mapman id Description
27.1.4 Multi-process regulation.circadian clock system.time-of-day-dependent expressed repressor (PRR)