Gene: Solyc04g010230.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g010230.4
  • Transcript Identifier Solyc04g010230.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 3589135-3593951 : positive

Gene Family Information

  • ID HOM05D000131
  • #Genes/#Species 2694/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g010230.4.1
  • uniprot A0A3Q7GQI2
  • gene_id Solyc04g010230

Descriptions

  • Description Pectate lyase (AHRD V3.3 *** A0A2G2X9W3_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045490
IEA
GOA Databasepectin catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030570
IEA
GOA Databasepectate lyase activity
GO:0030570
IEA
InterPropectate lyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018082 AmbAllergen
IPR012334 Pectin lyase fold
IPR002022 Pectate lyase
IPR045032 Pectin lyase family
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
50.4.2 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase