Gene: Solyc04g008420.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g008420.1
  • Transcript Identifier Solyc04g008420.1.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 2069304-2072388 : positive

Gene Family Information

  • ID HOM05D001174
  • #Genes/#Species 529/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g008420.1.1
  • uniprot K4BNZ8
  • gene_id Solyc04g008420

Descriptions

  • Description Zinc finger, FYVE/PHD-type (AHRD V3.3 *** A0A2U1NER7_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010208
ISO
PLAZA Integrative Orthologypollen wall assembly AT5G22260
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G22260
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT5G22260
GO:0043068
ISO
PLAZA Integrative Orthologypositive regulation of programmed cell death Os09g0449000
GO:0022414
ISO
PLAZA Integrative Orthologyreproductive process AT5G22260
GO:0009555
ISO
PLAZA Integrative Orthologypollen development Os09g0449000
GO:0071367
ISO
PLAZA Integrative Orthologycellular response to brassinosteroid stimulus AT5G22260
GO:0048655
ISO
PLAZA Integrative Orthologyanther wall tapetum morphogenesis AT5G22260
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT5G22260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G22260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011011 Zinc finger, FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
15.5.29 RNA biosynthesis.transcriptional regulation.transcription factor (PHD)
21.8.1.1 Cell wall organisation.sporopollenin.biosynthesis.transcriptional regulator (MS1)