Gene: Solyc03g111740.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g111740.3
  • Transcript Identifier Solyc03g111740.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 56796903-56799306 : negative

Gene Family Information

  • ID HOM05D000464
  • #Genes/#Species 1137/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g111740.3.1
  • uniprot A0A3Q7FPP2
  • gene_id Solyc03g111740

Descriptions

  • Description WD40 repeat (AHRD V3.3 *** A0A200R4I2_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000045
IBA
GOA Databaseautophagosome assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000421
IBA
GOA Databaseautophagosome membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
Mapman id Description
19.3.3.3.3 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG16)