Gene: Solyc03g031860.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g031860.3
  • Transcript Identifier Solyc03g031860.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 4235026-4238327 : positive

Gene Family Information

  • ID HOM05D001875
  • #Genes/#Species 351/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g031860.3.1
  • uniprot P08196
  • gene_id Solyc03g031860

Descriptions

  • Description Phytoene synthase 1,Pfam:PF00494
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016117
IBA
IEA
GOA Databasecarotenoid biosynthetic process
GO:0016117
IDA
Gene Ontologycarotenoid biosynthetic process1
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0008299
IEA
GOA Databaseisoprenoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046905
ISO
PLAZA Integrative Orthology15-cis-phytoene synthase activity Zm00001eb367770
GO:0016767
IBA
IEA
GOA Databasegeranylgeranyl-diphosphate geranylgeranyltransferase activity
GO:0005515
IPI
GOA Databaseprotein binding
GO:0016765
IEA
GOA Databasetransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0004311
IEA
GOA Databasefarnesyltranstransferase activity
GO:0004311
IEA
InterProfarnesyltranstransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016740
IEA
InterProtransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule Zm00001eb367770
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002060 Squalene/phytoene synthase
IPR008949 Isoprenoid synthase domain superfamily
IPR044843 Trans-isoprenyl diphosphate synthases, bacterial-type
IPR033904 Trans-isoprenyl diphosphate synthases, head-to-head
Mapman id Description
9.1.6.1.1 Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY)